Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930511.1_cds_XP_016477532.1_69252
CDS Infomation

[gene=LOC107798994] [db_xref=GeneID:107798994] [protein=glycine--tRNA ligase, mitochondrial 1-like] [protein_id=XP_016477532.1] [location=join(3249..3734,4527..4909,5210..5327,5527..5721,5813..6037,7209..7268,7359..7439,9665..10070,10780..11012)] [gbkey=CDS]
Sequence

ATGCGTATCGTTCGTGCTCTCACTACCTGCGCGCTTTCTCTTCGCCACCGCGTAATCTCC
ACTCATCTTCTCCGCACTCGTTTATTTCTAAAACCTTACACCGGAGCTCCTGTAACAATG
GCCGCCACCGCCGAAGACTCACTCCGCCAAGCTCTTGCTCAGAAGCAATCGAGCATCGAG
TTCCAAGGCAACGCCGTCCGCCAGTTAAAGTCGTCCGGTGCTTCCAAGCCGGAAATCGAA
GCTGCCGTTCAAGCTTTAAACGCGTTGAAGCTCGAGAAATCATCCATCGAGAGCCGGCTT
ATAGCCGCTGCCGGCGGTTCGTCGTCCGCCAGCAGAGATGCGTTCCGTCAGAACGTCGTT
AACACTCTCGAGCGCCGTCTGTTTTATATTCCGTCTTTCAAAATATATCGTGGCGTCGCT
GGCCTTTATGATTACGGCCCCCCTGGCTGTTCTGTCAAGTCCAATGTACTCGCCTTCTGG
CGTCAGCATTTTGTTTTGGAGGAGAACATGTTGGAAGTTGACTGTCCATGTGTGACCCCT
GAGGTTGTCCTTAAGGCATCAGGTCACGTTGAAAAGTTCACTGATCTTATGGTTAAGGAC
GAGAAGACAGGAACATGTTATCGAGCTGATCATTTGCTCAAGGATTATTGTAAAGAAAAA
CTTGAGAAAGACTTCAGCTTGTCTTCGGAAAAGGCTGCAGAGTTGAAGCACATCCTTGCT
GTCTTGGATGATCTCTCTGCTGAGCAGCTTGGTGCCAAGATAAAGGAGTATGGTATAACT
GCACCGGATACAAAGAATCCACTTTCTGATCCTTATCCATTCAATCTAATGTTTCAGACA
TCCATTGGTCCATCTGGCGTTAGCCCAGGGTATATGCGTCCTGAAACAGCACAAGGCATA
TTTGTAAATTTCAAAGATCTTTACTATTATAACGGAAATAAGCTTCCCTTTGCTGCTGCT
CAAATTGGTCAGGCTTTTAGAAATGAGATATCTCCTCGACAAGGTCTTCTCAGAGTGCGT
GAGTTCACTCTGGCAGAAATTGAACATTTCGTTGATCCCCAGGACAAATCTCATCCAAAA
TTTTTGGATGTTGCAAAACTGGAGTTTCTAATGTTTCCTAGGGATGAACAAGTGTCTGGG
CAATGTGCAAAGAGACTTCAGCTTGGTGAAGCTGTTTCTAGTGGAATTGTCAATAATGAA
ACACTCGGATACTTCATTGGGAGAGTTTATCTTTTCCTAACACGACTTGGAATAGACAAA
GAGCGTCTGCGTTTCCGTCAGCATCTTGCAAATGAGATGGCTCACTATGCTGCAGATTGT
TGGGATGCTGAAATTGAGAGTTCTTACGGTTGGATTGAATGTGTTGGGATTGCTGATAGA
TCTGCATATGATTTGCGTGCCCATTCGGAAAAAAGTTCTGTAGCTCTTGTGGCTCAGGAG
AAATTCTCAGAACCAAGAGAAGTAGAGAAATTGGTAATAACACCTATGAAGAAGGAGCTC
GGACTTGCATTTAAGGGCAACCAAAAGATGGTGACTGAATCCTTGGAGGCAATGGAAGAA
AAGGTGGCTATGGAGATGAAGGCTGATCTGGAATCTAAGGGAGAGGTAGAGTTCCATGTA
TGTACTCTTGGGAAGAATGTCACCATTAAGAAAAGCATGGTCTCTATTTCCAAGGAAAAA
AAGAAAGAGCACCAAAGGGTGTTTACACCTTCAGTGATTGAGCCCTCATTTGGAATTGGG
CGGATAATATATTGTCTTTATGAGCATTCATTCTACACAAGGCCAAGTAAAGGTGGAGAT
GAGCAGCTAAATGTGTTCCGCTTCCCCCCGCTAGTGGCTCCCATCAAATGCACTGTTTTT
CCACTGGTTCAGAATCAACAATATGAAGAAGTTGCCAAGTTAATCTCAAAGTCTTTGACT
GCTGCTGGAATATCACATAAGATTGATATAACAGGTACTTCTATAGGGAAAAGGTATGCA
AGAACAGATGAACTTGGTGTTCCCTTTGCCATCACTGTCGATTCGACATCATCAGTTACA
GTGCGAGAGAGGGATAGCAAAGATCAGGTCCGGGTGAGCACGGATAAGGTCGCATCAGTT
GTGAGGGAAGTGACTGATGGAGTGAGCACATGGGCAGATGTGTTGAAGGTGTATCCTCTA
CATTCTTCAGGAACTGCAGAAGAGTGA

Peptide Sequence

PEP ID

XP_016477532.1
PEP Infomation

PREDICTED: glycine--tRNA ligase, mitochondrial 1-like [Nicotiana tabacum]
Sequence

MRIVRALTTCALSLRHRVISTHLLRTRLFLKPYTGAPVTMAATAEDSLRQALAQKQSSIE
FQGNAVRQLKSSGASKPEIEAAVQALNALKLEKSSIESRLIAAAGGSSSASRDAFRQNVV
NTLERRLFYIPSFKIYRGVAGLYDYGPPGCSVKSNVLAFWRQHFVLEENMLEVDCPCVTP
EVVLKASGHVEKFTDLMVKDEKTGTCYRADHLLKDYCKEKLEKDFSLSSEKAAELKHILA
VLDDLSAEQLGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSIGPSGVSPGYMRPETAQGI
FVNFKDLYYYNGNKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPQDKSHPK
FLDVAKLEFLMFPRDEQVSGQCAKRLQLGEAVSSGIVNNETLGYFIGRVYLFLTRLGIDK
ERLRFRQHLANEMAHYAADCWDAEIESSYGWIECVGIADRSAYDLRAHSEKSSVALVAQE
KFSEPREVEKLVITPMKKELGLAFKGNQKMVTESLEAMEEKVAMEMKADLESKGEVEFHV
CTLGKNVTIKKSMVSISKEKKKEHQRVFTPSVIEPSFGIGRIIYCLYEHSFYTRPSKGGD
EQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKLISKSLTAAGISHKIDITGTSIGKRYA
RTDELGVPFAITVDSTSSVTVRERDSKDQVRVSTDKVASVVREVTDGVSTWADVLKVYPL
HSSGTAEE

Transcript Sequence

Gene sequence data has not been registered.